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Genome Databases (16)

See Also:

Top/Science/Biology/Genetics/Eukaryotic/Animal/Mammal/Databases and Maps

Sites:

» Carbohydrate-Active Enzymes (CAZy) database
Describes the families of structurally-related catalytic and carbohydrate-binding functional domains of enzymes that degrade, modify, or create glycosidic bonds.
http://afmb.cnrs-mrs.fr/CAZY/

» Dictyostelium discoideum genome annotation and analysis
Genome annotation and analysis portal for the slime mold Dictyostelium discoideum.
http://dictyworkbench.sdsc.edu

» EURExpress II
A transcriptome-wide atlas database for the developing mouse embryo established by RNA in situ hybridization.
http://www.eurexpress.org/

» FlyMine
An integrated database of genomic, expression and protein data for Drosophila and Anopheles.
http://www.flymine.org

» GenomeSeek
A fully-searchable database to provide information and easy access to over 200 current and completed genome projects.
http://genamics.com/genomes/

» Gramene: A comparative genomic resource for grains
Gramene is a curated, open-source data resource that provides agricultural researchers and plant breeders with biological and genomic information on rice and other grasses.
http://www.gramene.org

» HCNetDat
DNA microarray gene annotation database.
http://www.stjuderesearch.org/hcnetdat/

» Human Ageing Genomic Resources
A collection of databases and tools designed to help researchers understand the genetics of human ageing.
http://genomics.senescence.info/

» Human Genome Sequencing Center
Provides direct access to the data computed on several organisms such as Rat, Mouse, Drosophila, and Bovine as it relates to human genome sequencing.
http://www.hgsc.bcm.tmc.edu/

» MODOMICS
MODOMICS is a relational database that integrates information about the chemical structure of modified nucleosides, their localization in RNA sequences, pathways of their biosynthesis and enzymes that carry out the respective reactions.
http://genesilico.pl/modomics/

http://www.plantgenomics.iastate.edu/maize/

» Maize Genome Assembly Project
Iowa State University provides an assembly of the maize genome for download and tools for searching and viewing the assembly online.
http://www.plantgenomics.iastate.edu/maize/

» Mouse Genome Informatics
This site contains information on mouse genetic markers, mapping, phenotypes, mammalian homology and gene expression. All data are searchable through a set of Query Forms.
http://www.informatics.jax.org/

» PhenomicDB
PhenomicDB is a multi-organism phenotype/genotype database. Users can compare the phenotypes of a gene over many organisms simultaneously.
http://www.phenomicdb.de

» Rat Genome Database
Contains rat genomic data such as genes, SSLPs, ESTs, QTLs, and strain information and tools such as vcmap, genome scanner, rhmap server, metagene. Also has a rat research community forum.
http://rgd.mcw.edu

» SOL Genomics Network
Integrated clade oriented genome database for the Solanaceae (tomato, potato, pepper, eggplant etc.) and other Asterids. Contains genetic maps, gene sequences, phenotypic descriptions and images, tomato genome sequence and gene annotations.
http://sgn.cornell.edu

» SYNapse DataBase
SynDB, contains a collection of proteins known or predicted to be associated with synaptic activities and functions.
http://syndb.cbi.pku.edu.cn

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Last Updated: 2006-05-03 07:43:24

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